Ancient Bacteria May Be Oldest Life Form
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| Two views of the
crystal from which ancient bacteria were isolated. (Reproduced
with permission from Nature.) |
Alarm bells ring as microbiologistssome convinced, others
skepticalcontemplate the purported longevity of persistently dormant,
recently revived, and perhaps extraordinarily ancient microorganisms.
Russell Vreeland of West Chester University in Pennsylvania and his
colleagues claim to have reawakened very old bacteria from spores inside
a 250-million-year-old salt crystal. If the results hold, "then it
is the oldest living organism," says Vreeland's collaborator
William Rosenzweig. Indeed, the cells from which those spores presumably
formed were alive and active before the time of the dinosaurs. "Our
plans are to study the bacterium and learn everything it wants to tell
us about its physiology, morphology and genetics," adds Vreeland,
who is convinced these studies will provide insights into very early
life.
However, this study and others like it trigger a great deal of
skepticism, some of it still raging following an announcement some five
years ago by Raul Cano and colleagues at California Polytechnic State
University. They claimed to have revived bacteria from spores within the
intact carcass of a bee that was trapped in amber 25 to 30 million years
ago. Vreeland's microorganisms derive from spores that he says are as
much as 10 times older.
Cano's experiments became associated with a then-recent novel and
movie, Jurassic Park, in which ingenious but unscrupulous
scientists revived dinosaurs through cloning techniques. "Jurassic
Park was neat, but this beats it hands down," says Paul Renne,
a geologist at the University of California, Berkeley, referring to
Vreeland's revitalized spores. "The idea of having a living glimpse
of what life looked like 250 million years ago is pretty
spectacular."
Vreeland and his collaborators obtained the controversial spores from
intact salt crystals (see figure) found among hundreds of pounds of rock
salt retrieved from an underground nuclear waste site near Carlsbad,
N.M. The deep-set formation is at least 250 million years old, and is
"one of the best if not the best-characterized salt formation in
the world," says Vreeland, whose findings are reported in the 19
October issue of Nature (407:897-900). The West Chester
University researchers carefully removed spores from a fluid-filled
region of one crystal, from which they cultured a Bacillus isolate,
designated 2-9-3, in a medium containing 20% NaCl. A second spore
isolated from the same fluid and another from fluid in a second crystal
have yet to be studied.
Steps taken while the material was extracted from the crystal reduced
the chance of contamination with outside microbes to less than 1 in 100
million, Vreeland says. But proof that those techniques were aseptic
cannot be absolute, he admits. Indeed, much of the intense debate over
these findings revolves around the integrity of the salt crystal and
whether its contents were contaminated before Vreeland's extractions
began. "The fact that the salt crystal had no clearly visible
imperfections does not exclude the trivial explanation of fine cracks
permeable to present-day bacteria," says Tomas Lindahl of the
Imperial Cancer Research Fund, Hertfordshire, United Kingdom, who is a
critic of this and other research claiming to have recovered live,
preserved bacteria from ancient substances. "Unlike amber or rocks
or permafrost, salt is not an impermeable material," points out
Chris McKay, a biologist at the National Aeronautics and Space Agency's
Ames Research Center.
However, Vreeland remains confident that the microorganisms he is
studying are ancient and that the spores from which they derived were
hermetically trapped within the crystal during its formation. Thus, he
maintains that what grew out from the spores is not a modern-day bug
that entered that crystal recently through some microscopic crack, or
during dissolution and reformation of the crystal. "The crystal
shows no evidence of having been penetrated or recrystallized since the
time of formation," he says. "The three fluid inclusions that
we sampled were completely filled with fluid. If they had been
penetrated, there would have been air bubbles. [The inclusions] were
rectangular indicating there had been no movement of fluid through the
matrix, and they did not contain any extraneous material that might have
been carried in from the outside."
Lindahl says that gene sequence analysis of the Bacillus provides
additional reasons for doubting whether the microorganism derived from
the extracted spores is genuinely ancient. Thus, he points out that the
DNA sequence encoding the 16S ribosomal RNA (rRNA) of the Bacillus 2-9-3
isolate that Vreeland and his colleagues are studying closely resembles
that of Bacillus marismortui, which was isolated in modern times
from the Dead Sea. Lindahl says this similarity also suggests that
isolate 2-9-3 is a mere contaminant, either the same as, or closely
related to, the Dead Sea microbe.
Vreeland says that this genetic similarity between the two microbes
is no surprise to him. The close overlap in rRNA sequences between the
two reflects the vital function of that gene and the fact that its
structure was maintained is consistent with the two bacteria adapting to
similarly salty environments. "Much of our collective desire to see
differences (in sequences) is based on the idea that the nucleic acid is
a `clock' that changes at a `known' rate of 1% every 50 million
years," he says. "But the clock is based on modern organisms
looking backward, so maybe the calibration is off. Alternately, the Dead
Sea formed 6-8 million years ago. If B. marismortui was in salt
itself until then and released at that time, then the `clock' is right
on the money."
Resolution of the debate could hinge on what researchers find when
they probe other salt deposits for microbes. For now, the possibility
that a 250-million-year-old life form retained its vitality is causing
intense excitement in some circles. "Their results are the best
evidence yet for the extremely long-term survival of
microorganisms," says John Parkes, Department of Earth Sciences at
the University of Bristol, United Kingdom. "If bacteria can survive
for this length of time, why should they die at all?"
Brian Hoyle